diff options
| author | Willem Jan Palenstijn <Willem.Jan.Palenstijn@cwi.nl> | 2017-09-15 16:38:08 +0200 |
|---|---|---|
| committer | Willem Jan Palenstijn <Willem.Jan.Palenstijn@cwi.nl> | 2017-09-15 16:38:08 +0200 |
| commit | aa31a06235496c0d808e57c8ce914cb4b640bc6e (patch) | |
| tree | 33385e828ddca0b2857bac9e3dac4dd3723a3eee /samples | |
| parent | f6aa2db83dfea89f9d2cfc6fcbd3da141ee77e02 (diff) | |
| parent | 00a1c6118b2d64b867c8e640c295462bcccfc7c9 (diff) | |
| download | astra-aa31a06235496c0d808e57c8ce914cb4b640bc6e.tar.gz astra-aa31a06235496c0d808e57c8ce914cb4b640bc6e.tar.bz2 astra-aa31a06235496c0d808e57c8ce914cb4b640bc6e.tar.xz astra-aa31a06235496c0d808e57c8ce914cb4b640bc6e.zip | |
Merge branch 'master' into parallel_vec
Diffstat (limited to 'samples')
39 files changed, 478 insertions, 416 deletions
diff --git a/samples/matlab/s001_sinogram_par2d.m b/samples/matlab/s001_sinogram_par2d.m index 4494e7b..0295cdf 100644 --- a/samples/matlab/s001_sinogram_par2d.m +++ b/samples/matlab/s001_sinogram_par2d.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- % Create a basic 256x256 square volume geometry diff --git a/samples/matlab/s002_data2d.m b/samples/matlab/s002_data2d.m index a91071f..b082cb3 100644 --- a/samples/matlab/s002_data2d.m +++ b/samples/matlab/s002_data2d.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- vol_geom = astra_create_vol_geom(256, 256); diff --git a/samples/matlab/s003_gpu_reconstruction.m b/samples/matlab/s003_gpu_reconstruction.m index efb5c68..d98f720 100644 --- a/samples/matlab/s003_gpu_reconstruction.m +++ b/samples/matlab/s003_gpu_reconstruction.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- vol_geom = astra_create_vol_geom(256, 256); diff --git a/samples/matlab/s004_cpu_reconstruction.m b/samples/matlab/s004_cpu_reconstruction.m index f25cd2b..96f892a 100644 --- a/samples/matlab/s004_cpu_reconstruction.m +++ b/samples/matlab/s004_cpu_reconstruction.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- vol_geom = astra_create_vol_geom(256, 256); diff --git a/samples/matlab/s005_3d_geometry.m b/samples/matlab/s005_3d_geometry.m index 4b7360b..227dccd 100644 --- a/samples/matlab/s005_3d_geometry.m +++ b/samples/matlab/s005_3d_geometry.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- vol_geom = astra_create_vol_geom(64, 64, 64); diff --git a/samples/matlab/s006_3d_data.m b/samples/matlab/s006_3d_data.m index 32d88cc..dd45550 100644 --- a/samples/matlab/s006_3d_data.m +++ b/samples/matlab/s006_3d_data.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- % Create a 3D volume geometry. diff --git a/samples/matlab/s007_3d_reconstruction.m b/samples/matlab/s007_3d_reconstruction.m index fc9aca6..17c5d8c 100644 --- a/samples/matlab/s007_3d_reconstruction.m +++ b/samples/matlab/s007_3d_reconstruction.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- vol_geom = astra_create_vol_geom(128, 128, 128); diff --git a/samples/matlab/s008_gpu_selection.m b/samples/matlab/s008_gpu_selection.m index a9e152d..7a24028 100644 --- a/samples/matlab/s008_gpu_selection.m +++ b/samples/matlab/s008_gpu_selection.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- vol_geom = astra_create_vol_geom(256, 256); diff --git a/samples/matlab/s009_projection_matrix.m b/samples/matlab/s009_projection_matrix.m index efda0d2..645986b 100644 --- a/samples/matlab/s009_projection_matrix.m +++ b/samples/matlab/s009_projection_matrix.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- vol_geom = astra_create_vol_geom(256, 256); diff --git a/samples/matlab/s010_supersampling.m b/samples/matlab/s010_supersampling.m index 148f6ad..86a973d 100644 --- a/samples/matlab/s010_supersampling.m +++ b/samples/matlab/s010_supersampling.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- vol_geom = astra_create_vol_geom(256, 256); diff --git a/samples/matlab/s011_object_info.m b/samples/matlab/s011_object_info.m index 61ecb83..85665fd 100644 --- a/samples/matlab/s011_object_info.m +++ b/samples/matlab/s011_object_info.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- % Create two volume geometries diff --git a/samples/matlab/s012_masks.m b/samples/matlab/s012_masks.m index d3611a6..26d48a2 100644 --- a/samples/matlab/s012_masks.m +++ b/samples/matlab/s012_masks.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- diff --git a/samples/matlab/s013_constraints.m b/samples/matlab/s013_constraints.m index d72195c..07bdb05 100644 --- a/samples/matlab/s013_constraints.m +++ b/samples/matlab/s013_constraints.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- % In this example we will create a reconstruction constrained to diff --git a/samples/matlab/s014_FBP.m b/samples/matlab/s014_FBP.m index faf91fb..fb91a41 100644 --- a/samples/matlab/s014_FBP.m +++ b/samples/matlab/s014_FBP.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- vol_geom = astra_create_vol_geom(256, 256); diff --git a/samples/matlab/s015_fp_bp.m b/samples/matlab/s015_fp_bp.m index 8cc417e..56c5ed4 100644 --- a/samples/matlab/s015_fp_bp.m +++ b/samples/matlab/s015_fp_bp.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- diff --git a/samples/matlab/s016_plots.m b/samples/matlab/s016_plots.m index 1455c6d..56f47d8 100644 --- a/samples/matlab/s016_plots.m +++ b/samples/matlab/s016_plots.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- vol_geom = astra_create_vol_geom(256, 256); diff --git a/samples/matlab/s017_opTomo.m b/samples/matlab/s017_opTomo.m index 891a93d..71f8d55 100644 --- a/samples/matlab/s017_opTomo.m +++ b/samples/matlab/s017_opTomo.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- % This sample illustrates the use of opTomo. diff --git a/samples/matlab/s020_3d_multiGPU.m b/samples/matlab/s020_3d_multiGPU.m index bade325..46b984e 100644 --- a/samples/matlab/s020_3d_multiGPU.m +++ b/samples/matlab/s020_3d_multiGPU.m @@ -1,11 +1,11 @@ % ----------------------------------------------------------------------- % This file is part of the ASTRA Toolbox % -% Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp -% 2014-2015, CWI, Amsterdam +% Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +% 2014-2016, CWI, Amsterdam % License: Open Source under GPLv3 % Contact: astra@uantwerpen.be -% Website: http://sf.net/projects/astra-toolbox +% Website: http://www.astra-toolbox.com/ % ----------------------------------------------------------------------- diff --git a/samples/python/s001_sinogram_par2d.py b/samples/python/s001_sinogram_par2d.py index 1d1b912..11ca748 100644 --- a/samples/python/s001_sinogram_par2d.py +++ b/samples/python/s001_sinogram_par2d.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s002_data2d.py b/samples/python/s002_data2d.py index 35fb91f..b7fc969 100644 --- a/samples/python/s002_data2d.py +++ b/samples/python/s002_data2d.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s003_gpu_reconstruction.py b/samples/python/s003_gpu_reconstruction.py index 07b38ef..1a94b55 100644 --- a/samples/python/s003_gpu_reconstruction.py +++ b/samples/python/s003_gpu_reconstruction.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s004_cpu_reconstruction.py b/samples/python/s004_cpu_reconstruction.py index 8385cf8..3b6ffbe 100644 --- a/samples/python/s004_cpu_reconstruction.py +++ b/samples/python/s004_cpu_reconstruction.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s005_3d_geometry.py b/samples/python/s005_3d_geometry.py index a7f7a3d..cd48b1e 100644 --- a/samples/python/s005_3d_geometry.py +++ b/samples/python/s005_3d_geometry.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- try: from six.moves import range diff --git a/samples/python/s006_3d_data.py b/samples/python/s006_3d_data.py index 5178179..50efd99 100644 --- a/samples/python/s006_3d_data.py +++ b/samples/python/s006_3d_data.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s007_3d_reconstruction.py b/samples/python/s007_3d_reconstruction.py index 40e9556..85d029a 100644 --- a/samples/python/s007_3d_reconstruction.py +++ b/samples/python/s007_3d_reconstruction.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s008_gpu_selection.py b/samples/python/s008_gpu_selection.py index a180802..9fa9d49 100644 --- a/samples/python/s008_gpu_selection.py +++ b/samples/python/s008_gpu_selection.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s009_projection_matrix.py b/samples/python/s009_projection_matrix.py index e20d58c..dccaa4b 100644 --- a/samples/python/s009_projection_matrix.py +++ b/samples/python/s009_projection_matrix.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s010_supersampling.py b/samples/python/s010_supersampling.py index 1a337bc..42d7296 100644 --- a/samples/python/s010_supersampling.py +++ b/samples/python/s010_supersampling.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s011_object_info.py b/samples/python/s011_object_info.py index 02f387a..3442a9f 100644 --- a/samples/python/s011_object_info.py +++ b/samples/python/s011_object_info.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra diff --git a/samples/python/s012_masks.py b/samples/python/s012_masks.py index 0f667b0..073515f 100644 --- a/samples/python/s012_masks.py +++ b/samples/python/s012_masks.py @@ -1,29 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- - +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s013_constraints.py b/samples/python/s013_constraints.py index 8b63d5e..ca8b2d8 100644 --- a/samples/python/s013_constraints.py +++ b/samples/python/s013_constraints.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s014_FBP.py b/samples/python/s014_FBP.py index 2f8e388..051eff7 100644 --- a/samples/python/s014_FBP.py +++ b/samples/python/s014_FBP.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s015_fp_bp.py b/samples/python/s015_fp_bp.py index ff0b30a..5d5e945 100644 --- a/samples/python/s015_fp_bp.py +++ b/samples/python/s015_fp_bp.py @@ -1,29 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- - +# ----------------------------------------------------------------------- # This example demonstrates using the FP and BP primitives with Matlab's lsqr # solver. Calls to FP (astra.create_sino) and diff --git a/samples/python/s016_plots.py b/samples/python/s016_plots.py index 8a8ba64..cc2a53a 100644 --- a/samples/python/s016_plots.py +++ b/samples/python/s016_plots.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- try: from six.moves import range diff --git a/samples/python/s017_OpTomo.py b/samples/python/s017_OpTomo.py index 214e9a7..b568570 100644 --- a/samples/python/s017_OpTomo.py +++ b/samples/python/s017_OpTomo.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s018_plugin.py b/samples/python/s018_plugin.py index 85b5486..dbd9274 100644 --- a/samples/python/s018_plugin.py +++ b/samples/python/s018_plugin.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2015 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np @@ -124,6 +123,14 @@ if __name__=='__main__': # We can also use OpTomo to call the plugin rec_op = W.reconstruct('LANDWEBER-PLUGIN', sinogram, 100, extraOptions={'Relaxation':1.5}) + + # ASTRA also comes with built-in plugins: + astra.plugin.register(astra.plugins.SIRTPlugin) + astra.plugin.register(astra.plugins.CGLSPlugin) + rec_sirt = W.reconstruct('SIRT-PLUGIN', sinogram, 100, extraOptions={'Relaxation':1.5}) + rec_cgls = W.reconstruct('CGLS-PLUGIN', sinogram, 100) + + import pylab as pl pl.gray() pl.figure(1) @@ -132,6 +139,10 @@ if __name__=='__main__': pl.imshow(rec_rel,vmin=0,vmax=1) pl.figure(3) pl.imshow(rec_op,vmin=0,vmax=1) + pl.figure(4) + pl.imshow(rec_sirt,vmin=0,vmax=1) + pl.figure(5) + pl.imshow(rec_cgls,vmin=0,vmax=1) pl.show() # Clean up. diff --git a/samples/python/s019_experimental_multires.py b/samples/python/s019_experimental_multires.py index cf38e53..1aff223 100644 --- a/samples/python/s019_experimental_multires.py +++ b/samples/python/s019_experimental_multires.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s020_3d_multiGPU.py b/samples/python/s020_3d_multiGPU.py index d6799c4..11a1e11 100644 --- a/samples/python/s020_3d_multiGPU.py +++ b/samples/python/s020_3d_multiGPU.py @@ -1,28 +1,27 @@ -#----------------------------------------------------------------------- -#Copyright 2013 Centrum Wiskunde & Informatica, Amsterdam +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam # -#Author: Daniel M. Pelt -#Contact: D.M.Pelt@cwi.nl -#Website: http://dmpelt.github.io/pyastratoolbox/ +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ # +# This file is part of the ASTRA Toolbox. # -#This file is part of the Python interface to the -#All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). # -#The Python interface to the ASTRA Toolbox is free software: you can redistribute it and/or modify -#it under the terms of the GNU General Public License as published by -#the Free Software Foundation, either version 3 of the License, or -#(at your option) any later version. +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. # -#The Python interface to the ASTRA Toolbox is distributed in the hope that it will be useful, -#but WITHOUT ANY WARRANTY; without even the implied warranty of -#MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -#GNU General Public License for more details. +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. # -#You should have received a copy of the GNU General Public License -#along with the Python interface to the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. # -#----------------------------------------------------------------------- +# ----------------------------------------------------------------------- import astra import numpy as np diff --git a/samples/python/s021_pygpu.py b/samples/python/s021_pygpu.py new file mode 100644 index 0000000..db6584b --- /dev/null +++ b/samples/python/s021_pygpu.py @@ -0,0 +1,72 @@ +# ----------------------------------------------------------------------- +# Copyright: 2010-2016, iMinds-Vision Lab, University of Antwerp +# 2013-2016, CWI, Amsterdam +# +# Contact: astra@uantwerpen.be +# Website: http://www.astra-toolbox.com/ +# +# This file is part of the ASTRA Toolbox. +# +# +# The ASTRA Toolbox is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# The ASTRA Toolbox is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. +# +# ----------------------------------------------------------------------- + +import astra +import numpy as np +import pygpu +import pylab + +# Initialize pygpu +ctx = pygpu.init('cuda') +pygpu.set_default_context(ctx) + +vol_geom = astra.create_vol_geom(128, 128, 128) +angles = np.linspace(0, 2 * np.pi, 180, False) +proj_geom = astra.create_proj_geom('cone', 1.0, 1.0, 128, 192, angles, 1000, 0) + +# Create a simple hollow cube phantom, as a pygpu gpuarray +vol_gpuarr = pygpu.gpuarray.zeros(astra.functions.geom_size(vol_geom), dtype='float32') +vol_gpuarr[17:113, 17:113, 17:113] = 1 +vol_gpuarr[33:97, 33:97, 33:97] = 0 + +# Create a pygpu gpuarray for the output projection data +proj_gpuarr = pygpu.gpuarray.zeros(astra.functions.geom_size(proj_geom), dtype='float32') + +# Create the astra GPULink objects and create astra data3d objects from them +z, y, x = proj_gpuarr.shape +proj_data_link = astra.data3d.GPULink(proj_gpuarr.gpudata, x, y, z, + proj_gpuarr.strides[-2]) +z, y, x = vol_gpuarr.shape +vol_link = astra.data3d.GPULink(vol_gpuarr.gpudata, x, y, z, + vol_gpuarr.strides[-2]) + +proj_id = astra.data3d.link('-sino', proj_geom, proj_data_link) +vol_id = astra.data3d.link('-vol', vol_geom, vol_link) + +# Run a 3D FP +cfg = astra.astra_dict('FP3D_CUDA') +cfg['VolumeDataId'] = vol_id +cfg['ProjectionDataId'] = proj_id +alg_id = astra.algorithm.create(cfg) +astra.algorithm.run(alg_id) + +pylab.figure(1) +pylab.gray() +pylab.imshow(proj_gpuarr[:, 20, :]) +pylab.show() + +astra.algorithm.delete(alg_id) +astra.data3d.delete(vol_id) +astra.data3d.delete(proj_id) |