diff options
21 files changed, 6 insertions, 667 deletions
diff --git a/include/astra/FanFlatBeamLineKernelProjector2D.h b/include/astra/FanFlatBeamLineKernelProjector2D.h index 1bfaf07..4492bdf 100644 --- a/include/astra/FanFlatBeamLineKernelProjector2D.h +++ b/include/astra/FanFlatBeamLineKernelProjector2D.h @@ -134,14 +134,6 @@ public: int _iMaxPixelCount, int& _iStoredPixelCount); - /** Create a list of detectors that are influenced by point [_iRow, _iCol]. - * - * @param _iRow row of the point - * @param _iCol column of the point - * @return list of SDetector2D structs - */ - virtual std::vector<SDetector2D> projectPoint(int _iRow, int _iCol); - /** Policy-based projection of all rays. This function will calculate each non-zero projection * weight and use this value for a task provided by the policy object. * diff --git a/include/astra/FanFlatBeamStripKernelProjector2D.h b/include/astra/FanFlatBeamStripKernelProjector2D.h index a6a303c..4942f6c 100644 --- a/include/astra/FanFlatBeamStripKernelProjector2D.h +++ b/include/astra/FanFlatBeamStripKernelProjector2D.h @@ -132,14 +132,6 @@ public: int _iMaxPixelCount, int& _iStoredPixelCount); - /** Create a list of detectors that are influenced by point [_iRow, _iCol]. - * - * @param _iRow row of the point - * @param _iCol column of the point - * @return list of SDetector2D structs - */ - virtual std::vector<SDetector2D> projectPoint(int _iRow, int _iCol); - /** Policy-based projection of all rays. This function will calculate each non-zero projection * weight and use this value for a task provided by the policy object. * diff --git a/include/astra/ParallelBeamBlobKernelProjector2D.h b/include/astra/ParallelBeamBlobKernelProjector2D.h index 46b0b52..ffae707 100644 --- a/include/astra/ParallelBeamBlobKernelProjector2D.h +++ b/include/astra/ParallelBeamBlobKernelProjector2D.h @@ -160,14 +160,6 @@ public: int _iMaxPixelCount, int& _iStoredPixelCount); - /** Create a list of detectors that are influenced by point [_iRow, _iCol]. - * - * @param _iRow row of the point - * @param _iCol column of the point - * @return list of SDetector2D structs - */ - virtual std::vector<SDetector2D> projectPoint(int _iRow, int _iCol); - /** Policy-based projection of all rays. This function will calculate each non-zero projection * weight and use this value for a task provided by the policy object. * diff --git a/include/astra/ParallelBeamDistanceDrivenProjector2D.h b/include/astra/ParallelBeamDistanceDrivenProjector2D.h index 67dd21b..6d1d633 100644 --- a/include/astra/ParallelBeamDistanceDrivenProjector2D.h +++ b/include/astra/ParallelBeamDistanceDrivenProjector2D.h @@ -138,14 +138,6 @@ public: int _iMaxPixelCount, int& _iStoredPixelCount); - /** Create a list of detectors that are influenced by point [_iRow, _iCol]. - * - * @param _iRow row of the point - * @param _iCol column of the point - * @return list of SDetector2D structs - */ - virtual std::vector<SDetector2D> projectPoint(int _iRow, int _iCol); - /** Policy-based projection of all rays. This function will calculate each non-zero projection * weight and use this value for a task provided by the policy object. diff --git a/include/astra/ParallelBeamDistanceDrivenProjector2D.inl b/include/astra/ParallelBeamDistanceDrivenProjector2D.inl index 6bf3b56..7b45ed1 100644 --- a/include/astra/ParallelBeamDistanceDrivenProjector2D.inl +++ b/include/astra/ParallelBeamDistanceDrivenProjector2D.inl @@ -81,8 +81,6 @@ void CParallelBeamDistanceDrivenProjector2D::projectBlock_internal(int _iProjFro const SParProjection * proj = &pVecProjectionGeometry->getProjectionVectors()[iAngle]; - float32 detSize = sqrt(proj->fDetUX * proj->fDetUX + proj->fDetUY * proj->fDetUY); - const bool vertical = fabs(proj->fRayX) < fabs(proj->fRayY); const float32 Ex = m_pVolumeGeometry->getWindowMinX() + pixelLengthX*0.5f; diff --git a/include/astra/ParallelBeamLineKernelProjector2D.h b/include/astra/ParallelBeamLineKernelProjector2D.h index f709e1d..4238919 100644 --- a/include/astra/ParallelBeamLineKernelProjector2D.h +++ b/include/astra/ParallelBeamLineKernelProjector2D.h @@ -132,14 +132,6 @@ public: int _iMaxPixelCount, int& _iStoredPixelCount); - /** Create a list of detectors that are influenced by point [_iRow, _iCol]. - * - * @param _iRow row of the point - * @param _iCol column of the point - * @return list of SDetector2D structs - */ - virtual std::vector<SDetector2D> projectPoint(int _iRow, int _iCol); - /** Policy-based projection of all rays. This function will calculate each non-zero projection * weight and use this value for a task provided by the policy object. * diff --git a/include/astra/ParallelBeamLinearKernelProjector2D.h b/include/astra/ParallelBeamLinearKernelProjector2D.h index a09dcd1..67d940e 100644 --- a/include/astra/ParallelBeamLinearKernelProjector2D.h +++ b/include/astra/ParallelBeamLinearKernelProjector2D.h @@ -135,14 +135,6 @@ public: int _iMaxPixelCount, int& _iStoredPixelCount); - /** Create a list of detectors that are influenced by point [_iRow, _iCol]. - * - * @param _iRow row of the point - * @param _iCol column of the point - * @return list of SDetector2D structs - */ - virtual std::vector<SDetector2D> projectPoint(int _iRow, int _iCol); - /** Policy-based projection of all rays. This function will calculate each non-zero projection * weight and use this value for a task provided by the policy object. diff --git a/include/astra/ParallelBeamLinearKernelProjector2D.inl b/include/astra/ParallelBeamLinearKernelProjector2D.inl index 485eef6..10d4892 100644 --- a/include/astra/ParallelBeamLinearKernelProjector2D.inl +++ b/include/astra/ParallelBeamLinearKernelProjector2D.inl @@ -156,7 +156,7 @@ void CParallelBeamLinearKernelProjector2D::projectBlock_internal(int _iProjFrom, float32 detSize = sqrt(proj->fDetUX * proj->fDetUX + proj->fDetUY * proj->fDetUY); - bool vertical = fabs(proj->fRayX) < fabs(proj->fRayY); + const bool vertical = fabs(proj->fRayX) < fabs(proj->fRayY); if (vertical) { RxOverRy = proj->fRayX/proj->fRayY; lengthPerRow = detSize * m_pVolumeGeometry->getPixelLengthX() * sqrt(proj->fRayY*proj->fRayY + proj->fRayX*proj->fRayX) / abs(proj->fRayY); diff --git a/include/astra/ParallelBeamStripKernelProjector2D.h b/include/astra/ParallelBeamStripKernelProjector2D.h index 153a454..597f8dc 100644 --- a/include/astra/ParallelBeamStripKernelProjector2D.h +++ b/include/astra/ParallelBeamStripKernelProjector2D.h @@ -133,14 +133,6 @@ public: int _iMaxPixelCount, int& _iStoredPixelCount); - /** Create a list of detectors that are influenced by point [_iRow, _iCol]. - * - * @param _iRow row of the point - * @param _iCol column of the point - * @return list of SDetector2D structs - */ - virtual std::vector<SDetector2D> projectPoint(int _iRow, int _iCol); - /** Policy-based projection of all rays. This function will calculate each non-zero projection * weight and use this value for a task provided by the policy object. * diff --git a/include/astra/Projector2D.h b/include/astra/Projector2D.h index 8e0b7a8..9d9130f 100644 --- a/include/astra/Projector2D.h +++ b/include/astra/Projector2D.h @@ -149,14 +149,6 @@ public: SPixelWeight* _pfWeightedPixels, int* _piRayStoredPixelCount); - /** Create a list of detectors that are influenced by point [_iRow, _iCol]. - * - * @param _iRow row of the point - * @param _iCol column of the point - * @return list of SDetector2D structs - */ - virtual std::vector<SDetector2D> projectPoint(int _iRow, int _iCol) = 0; - /** Returns the number of weights required for storage of all weights of one projection ray. * * @param _iProjectionIndex Index of the projection (zero-based). diff --git a/include/astra/SparseMatrixProjector2D.h b/include/astra/SparseMatrixProjector2D.h index db8c4e2..1fc44c5 100644 --- a/include/astra/SparseMatrixProjector2D.h +++ b/include/astra/SparseMatrixProjector2D.h @@ -133,14 +133,6 @@ public: int _iMaxPixelCount, int& _iStoredPixelCount); - /** Create a list of detectors that are influenced by point [_iRow, _iCol]. - * - * @param _iRow row of the point - * @param _iCol column of the point - * @return list of SDetector2D structs - */ - virtual std::vector<SDetector2D> projectPoint(int _iRow, int _iCol); - /** Policy-based projection of all rays. This function will calculate each non-zero projection * weight and use this value for a task provided by the policy object. * diff --git a/matlab/mex/astra_mex_projector3d_c.cpp b/matlab/mex/astra_mex_projector3d_c.cpp index 5581d6c..e760e3d 100644 --- a/matlab/mex/astra_mex_projector3d_c.cpp +++ b/matlab/mex/astra_mex_projector3d_c.cpp @@ -179,175 +179,6 @@ void astra_mex_projector3d_get_volume_geometry(int nlhs, mxArray* plhs[], int nr } //----------------------------------------------------------------------------------------- -/** -* [weights] = astra_mex_projector3d('weights_single_ray', pid, projection_index, detector_index); -*/ -void astra_mex_projector_weights_single_ray(int nlhs, mxArray* plhs[], int nrhs, const mxArray* prhs[]) -{ - //// step1: get input - //if (nrhs < 4) { - // mexErrMsgTxt("Not enough arguments. See the help document for a detailed argument list. \n"); - // return; - //} - //int iPid = (int)(mxGetScalar(prhs[1])); - //int iProjectionIndex = (int)(mxGetScalar(prhs[2])); - //int iDetectorIndex = (int)(mxGetScalar(prhs[3])); - - //// step2: get projector - //CProjector3D* pProjector; - //if (!(pProjector = CProjector3DManager::getSingleton().get(iPid))) { - // mexErrMsgTxt("Projector not found.\n"); - // return; - //} - // - //// step3: create output vars - //int iStoredPixelCount; - //int iMaxPixelCount = pProjector->getProjectionWeightsCount(iProjectionIndex); - //SWeightedPixel* pPixelsWeights = new SWeightedPixel3D[iMaxPixelCount]; - // - //// step4: perform operation - //pProjector->computeSingleRayWeights(iProjectionIndex, - // iDetectorIndex, - // pPixelsWeights, - // iMaxPixelCount, - // iStoredPixelCount); - - //// step5: return output - //if (1 <= nlhs) { - // mwSize dims[2]; - // dims[0] = iStoredPixelCount; - // dims[1] = 2; - - // plhs[0] = mxCreateNumericArray(2, dims, mxDOUBLE_CLASS, mxREAL); - // double* out = mxGetPr(plhs[0]); - - // for (int col = 0; col < iStoredPixelCount; col++) { - // out[col] = pPixelsWeights[col].m_iIndex; - // out[iStoredPixelCount+col] = pPixelsWeights[col].m_fWeight; - // //cout << pPixelsWeights[col].m_iIndex << " " << pPixelsWeights[col].m_fWeight <<endl; - // } - //} - // - //// garbage collection - //delete[] pPixelsWeights; -} - -////----------------------------------------------------------------------------------------- -///** -//* [weights] = astra_mex_projector('weights_projection', pid, projection_index); -//*/ -//void astra_mex_projector_weights_projection(int nlhs, mxArray* plhs[], int nrhs, const mxArray* prhs[]) -//{ -// // step1: get input -// if (nrhs < 3) { -// mexErrMsgTxt("Not enough arguments. See the help document for a detailed argument list. \n"); -// return; -// } -// int iPid = (int)(mxGetScalar(prhs[1])); -// int iProjectionIndex = (int)(mxGetScalar(prhs[2])); -// -// // step2: get projector -// CProjector2D* pProjector; -// if (!(pProjector = CProjectorManager::getSingleton().get(iPid))) { -// mexErrMsgTxt("Projector not found.\n"); -// return; -// } -// -// // step3: create output vars -// SWeightedPixel2D* pPixelsWheights = new SWeightedPixel2D[pProjector->getProjectionWeightsCount(iProjectionIndex)]; -// int* piRayStoredPixelCount = new int[pProjector->getProjectionGeometry()->getDetectorCount()]; -// -// // step4: perform operation -// pProjector->computeProjectionRayWeights(iProjectionIndex, pPixelsWheights, piRayStoredPixelCount); -// -// // step5: return output -// if (1 <= nlhs) { -// // get basic values -// int iMatrixSize = pProjector->getVolumeGeometry()->getWindowLengthX() * -// pProjector->getVolumeGeometry()->getWindowLengthY(); -// int iDetectorCount = pProjector->getProjectionGeometry()->getDetectorCount(); -// int iTotalStoredPixelCount = 0; -// for (int i = 0; i < iDetectorCount; i++) { -// iTotalStoredPixelCount += piRayStoredPixelCount[i]; -// } -// -// // create matlab sparse matrix -// plhs[0] = mxCreateSparse(iMatrixSize, // number of rows (#pixels) -// iDetectorCount, // number of columns (#detectors) -// iTotalStoredPixelCount, // number of non-zero elements -// mxREAL); // element type -// double* values = mxGetPr(plhs[0]); -// mwIndex* rows = mxGetIr(plhs[0]); -// mwIndex* cols = mxGetJc(plhs[0]); -// -// int currentBase = 0; -// int currentIndex = 0; -// for (int i = 0; i < iDetectorCount; i++) { -// for (int j = 0; j < piRayStoredPixelCount[i]; j++) { -// values[currentIndex + j] = pPixelsWheights[currentBase + j].m_fWeight; -// rows[currentIndex + j] = pPixelsWheights[currentBase + j].m_iIndex; -// } -// -// currentBase += pProjector->getProjectionWeightsCount(iProjectionIndex) / pProjector->getProjectionGeometry()->getDetectorCount(); -// currentIndex += piRayStoredPixelCount[i]; -// } -// cols[0] = piRayStoredPixelCount[0]; -// for (int j = 1; j < iDetectorCount; j++) { -// cols[j] = cols[j-1] + piRayStoredPixelCount[j]; -// } -// cols[iDetectorCount] = iTotalStoredPixelCount; -// } -// -//} -// -////----------------------------------------------------------------------------------------- -///** -//* output = astra_mex_projector('splat', pid, x, y); -//*/ -//void astra_mex_projector_splat(int nlhs, mxArray* plhs[], int nrhs, const mxArray* prhs[]) -//{ -// // step1: get input -// if (nrhs < 4) { -// mexErrMsgTxt("Not enough arguments. See the help document for a detailed argument list. \n"); -// return; -// } -// int iPid = (int)(mxGetScalar(prhs[1])); -// int iX = (int)(mxGetScalar(prhs[2])); -// int iY = (int)(mxGetScalar(prhs[3])); -// -// // step2: get projector -// CProjector2D* pProjector; -// if (!(pProjector = CProjectorManager::getSingleton().get(iPid))) { -// mexErrMsgTxt("Projector not found.\n"); -// return; -// } -// -// // step3: perform action -// vector<SDetector2D> detinfo = pProjector->projectPoint(iX, iY); -// -// // step4: output -// if (nlhs <= 1) { -// plhs[0] = mxCreateDoubleMatrix(detinfo.size(), // # rows -// 2, // # cols -// mxREAL); // datatype 32-bits -// double* out = mxGetPr(plhs[0]); -// -// // fill up output -// int i = 0; -// for (int x = 0; x < detinfo.size() ; x++) { -// out[i] = detinfo[x].m_iAngleIndex; -// i++; -// } -// for (int x = 0; x < detinfo.size() ; x++) { -// out[i] = detinfo[x].m_iDetectorIndex; -// i++; -// } -// } -// -// -//} - -//----------------------------------------------------------------------------------------- /** result = astra_mex_projector3d('is_cuda', id); * * Return is the specified projector is a cuda projector. @@ -395,8 +226,7 @@ static void printHelp() { mexPrintf("Please specify a mode of operation.\n"); mexPrintf("Valid modes: create, delete, clear, get_projection_geometry,\n"); - mexPrintf(" get_volume_geometry, weights_single_ray, weights_projection\n"); - mexPrintf(" splat, is_cuda\n"); + mexPrintf(" get_volume_geometry, is_cuda\n"); } //----------------------------------------------------------------------------------------- @@ -428,12 +258,6 @@ void mexFunction(int nlhs, mxArray* plhs[], astra_mex_projector3d_get_projection_geometry(nlhs, plhs, nrhs, prhs); } else if (sMode == "get_volume_geometry") { astra_mex_projector3d_get_volume_geometry(nlhs, plhs, nrhs, prhs); - } else if (sMode == "weights_single_ray") { - astra_mex_projector_weights_single_ray(nlhs, plhs, nrhs, prhs); - //} else if (sMode == "weights_projection") { - // astra_mex_projector_weights_projection(nlhs, plhs, nrhs, prhs); - //} else if (sMode == "splat") { - // astra_mex_projector_splat(nlhs, plhs, nrhs, prhs); } else if (sMode == "is_cuda") { astra_mex_projector3d_is_cuda(nlhs, plhs, nrhs, prhs); } else if (sMode == "help") { diff --git a/matlab/mex/astra_mex_projector_c.cpp b/matlab/mex/astra_mex_projector_c.cpp index 27c4b20..16da126 100644 --- a/matlab/mex/astra_mex_projector_c.cpp +++ b/matlab/mex/astra_mex_projector_c.cpp @@ -337,59 +337,6 @@ void astra_mex_projector_weights_projection(int nlhs, mxArray* plhs[], int nrhs, } //----------------------------------------------------------------------------------------- -/** hit_detectors = astra_mex_projector('splat', id, col, row); - * - * Create a list of detector indices which have a nonzero contribution to the projection matrix for a pixel [row,col]. - * id: identifier of the projector object as stored in the astra-library. - * col: column of the pixel - * row: row of the pixel - * hit_detectors: list of detector indices [angle_index, det_index] that are hit - */ -void astra_mex_projector_splat(int nlhs, mxArray* plhs[], int nrhs, const mxArray* prhs[]) -{ - // step1: get input - if (nrhs < 4) { - mexErrMsgTxt("Not enough arguments. See the help document for a detailed argument list. \n"); - return; - } - int iPid = (int)(mxGetScalar(prhs[1])); - int iX = (int)(mxGetScalar(prhs[2])); - int iY = (int)(mxGetScalar(prhs[3])); - - // step2: get projector - CProjector2D* pProjector = CProjector2DManager::getSingleton().get(iPid); - if (!pProjector || !pProjector->isInitialized()) { - mexErrMsgTxt("Projector not initialized.\n"); - return; - } - - // step3: perform action - vector<SDetector2D> detinfo = pProjector->projectPoint(iX, iY); - - // step4: output - if (nlhs <= 1) { - plhs[0] = mxCreateDoubleMatrix(detinfo.size(), // # rows - 2, // # cols - mxREAL); // datatype 32-bits - double* out = mxGetPr(plhs[0]); - - // fill up output - int i = 0; - int x; - for (x = 0; x < detinfo.size(); ++x) { - out[i] = detinfo[x].m_iAngleIndex; - ++i; - } - for (x = 0; x < detinfo.size(); ++x) { - out[i] = detinfo[x].m_iDetectorIndex; - ++i; - } - } - - -} - -//----------------------------------------------------------------------------------------- /** matrix_id = astra_mex_projector('matrix', id); * * Create an explicit projection matrix for this projector. @@ -467,7 +414,7 @@ static void printHelp() mexPrintf("Please specify a mode of operation.\n"); mexPrintf("Valid modes: create, delete, clear, info, projection_geometry,\n"); mexPrintf(" volume_geometry, weights_single_ray, weights_projection\n"); - mexPrintf(" splat, matrix, is_cuda\n"); + mexPrintf(" matrix, is_cuda\n"); } @@ -506,8 +453,6 @@ void mexFunction(int nlhs, mxArray* plhs[], astra_mex_projector_weights_single_ray(nlhs, plhs, nrhs, prhs); } else if (sMode == "weights_projection") { astra_mex_projector_weights_projection(nlhs, plhs, nrhs, prhs); - } else if (sMode == "splat") { - astra_mex_projector_splat(nlhs, plhs, nrhs, prhs); } else if (sMode == "matrix") { astra_mex_projector_matrix(nlhs, plhs, nrhs, prhs); } else if (sMode == "is_cuda") { diff --git a/src/FanFlatBeamLineKernelProjector2D.cpp b/src/FanFlatBeamLineKernelProjector2D.cpp index 6475ab2..a092504 100644 --- a/src/FanFlatBeamLineKernelProjector2D.cpp +++ b/src/FanFlatBeamLineKernelProjector2D.cpp @@ -160,14 +160,6 @@ void CFanFlatBeamLineKernelProjector2D::computeSingleRayWeights(int _iProjection } //---------------------------------------------------------------------------------------- -// Splat a single point -std::vector<SDetector2D> CFanFlatBeamLineKernelProjector2D::projectPoint(int _iRow, int _iCol) -{ - std::vector<SDetector2D> res; - return res; -} - -//---------------------------------------------------------------------------------------- //Result is always in [-PI/2; PI/2] float32 CFanFlatBeamLineKernelProjector2D::angleBetweenVectors(float32 _fAX, float32 _fAY, float32 _fBX, float32 _fBY) { diff --git a/src/FanFlatBeamStripKernelProjector2D.cpp b/src/FanFlatBeamStripKernelProjector2D.cpp index 7d25a55..c974b82 100644 --- a/src/FanFlatBeamStripKernelProjector2D.cpp +++ b/src/FanFlatBeamStripKernelProjector2D.cpp @@ -157,66 +157,3 @@ void CFanFlatBeamStripKernelProjector2D::computeSingleRayWeights(int _iProjectio projectSingleRay(_iProjectionIndex, _iDetectorIndex, p); _iStoredPixelCount = p.getStoredPixelCount(); } - -//---------------------------------------------------------------------------------------- -// Splat a single point -std::vector<SDetector2D> CFanFlatBeamStripKernelProjector2D::projectPoint(int _iRow, int _iCol) -{ - //float32 xUL = m_pVolumeGeometry->pixelColToCenterX(_iCol) - m_pVolumeGeometry->getPixelLengthX() * 0.5f; - //float32 yUL = m_pVolumeGeometry->pixelRowToCenterY(_iRow) - m_pVolumeGeometry->getPixelLengthY() * 0.5f; - //float32 xUR = m_pVolumeGeometry->pixelColToCenterX(_iCol) + m_pVolumeGeometry->getPixelLengthX() * 0.5f; - //float32 yUR = m_pVolumeGeometry->pixelRowToCenterY(_iRow) - m_pVolumeGeometry->getPixelLengthY() * 0.5f; - //float32 xLL = m_pVolumeGeometry->pixelColToCenterX(_iCol) - m_pVolumeGeometry->getPixelLengthX() * 0.5f; - //float32 yLL = m_pVolumeGeometry->pixelRowToCenterY(_iRow) + m_pVolumeGeometry->getPixelLengthY() * 0.5f; - //float32 xLR = m_pVolumeGeometry->pixelColToCenterX(_iCol) + m_pVolumeGeometry->getPixelLengthX() * 0.5f; - //float32 yLR = m_pVolumeGeometry->pixelRowToCenterY(_iRow) + m_pVolumeGeometry->getPixelLengthY() * 0.5f; - - std::vector<SDetector2D> res; - //// loop projectors and detectors - //for (int iProjection = 0; iProjection < m_pProjectionGeometry->getProjectionAngleCount(); ++iProjection) { - - // // get projection angle - // float32 theta = m_pProjectionGeometry->getProjectionAngle(iProjection); - // if (theta >= 7*PIdiv4) theta -= 2*PI; - // bool inverse = false; - // if (theta >= 3*PIdiv4) { - // theta -= PI; - // inverse = true; - // } - - // // calculate distance from the center of the voxel to the ray though the origin - // float32 tUL = xUL * cos(theta) + yUL * sin(theta); - // float32 tUR = xUR * cos(theta) + yUR * sin(theta); - // float32 tLL = xLL * cos(theta) + yLL * sin(theta); - // float32 tLR = xLR * cos(theta) + yLR * sin(theta); - // if (inverse) { - // tUL *= -1.0f; - // tUR *= -1.0f; - // tLL *= -1.0f; - // tLR *= -1.0f; - // } - // float32 tMin = min(tUL, min(tUR, min(tLL,tLR))); - // float32 tMax = max(tUL, max(tUR, max(tLL,tLR))); - - // // calculate the offset on the detectorarray (in indices) - // int dmin = (int)floor(m_pProjectionGeometry->detectorOffsetToIndexFloat(tMin)); - // int dmax = (int)ceil(m_pProjectionGeometry->detectorOffsetToIndexFloat(tMax)); - - // // add affected detectors to the list - // for (int i = dmin; i <= dmax; ++i) { - // if (i >= 0 && i < m_pProjectionGeometry->getDetectorCount()) { - // SDetector2D det; - // det.m_iAngleIndex = iProjection; - // det.m_iDetectorIndex = i; - // det.m_iIndex = iProjection * getProjectionGeometry()->getDetectorCount() + i; - // res.push_back(det); - // } - // } - //} - - //// return result vector - return res; - -} - -//---------------------------------------------------------------------------------------- diff --git a/src/ParallelBeamBlobKernelProjector2D.cpp b/src/ParallelBeamBlobKernelProjector2D.cpp index da21024..0fb658f 100644 --- a/src/ParallelBeamBlobKernelProjector2D.cpp +++ b/src/ParallelBeamBlobKernelProjector2D.cpp @@ -212,48 +212,3 @@ void CParallelBeamBlobKernelProjector2D::computeSingleRayWeights(int _iProjectio projectSingleRay(_iProjectionIndex, _iDetectorIndex, p); _iStoredPixelCount = p.getStoredPixelCount(); } -//---------------------------------------------------------------------------------------- -// Splat a single point -std::vector<SDetector2D> CParallelBeamBlobKernelProjector2D::projectPoint(int _iRow, int _iCol) -{ - // float32 x = m_pVolumeGeometry->pixelColToCenterX(_iCol); - // float32 y = m_pVolumeGeometry->pixelRowToCenterY(_iRow); - - // std::vector<SDetector2D> res; - // // loop projectors and detectors - // for (int iProjection = 0; iProjection < m_pProjectionGeometry->getProjectionAngleCount(); ++iProjection) { - - // // get projection angle - // float32 theta = m_pProjectionGeometry->getProjectionAngle(iProjection); - // if (theta >= 7*PIdiv4) theta -= 2*PI; - // bool inverse = false; - // if (theta >= 3*PIdiv4) { - // theta -= PI; - // inverse = true; - // } - - // // calculate distance from the center of the voxel to the ray though the origin - // float32 t = x * cos(theta) + y * sin(theta); - // if (inverse) t *= -1.0f; - - // // calculate the offset on the detectorarray (in indices) - // float32 d = m_pProjectionGeometry->detectorOffsetToIndexFloat(t); - // int dmin = (int)ceil(d - m_fBlobSize); - // int dmax = (int)floor(d + m_fBlobSize); - - // // add affected detectors to the list - // for (int i = dmin; i <= dmax; ++i) { - // if (d >= 0 && d < m_pProjectionGeometry->getDetectorCount()) { - // SDetector2D det; - // det.m_iAngleIndex = iProjection; - // det.m_iDetectorIndex = i; - // det.m_iIndex = iProjection * getProjectionGeometry()->getDetectorCount() + i; - // res.push_back(det); - // } - // } - // } - - // // return result vector - // return res; - return std::vector<SDetector2D>(); -} diff --git a/src/ParallelBeamDistanceDrivenProjector2D.cpp b/src/ParallelBeamDistanceDrivenProjector2D.cpp index a4ac450..531bef9 100644 --- a/src/ParallelBeamDistanceDrivenProjector2D.cpp +++ b/src/ParallelBeamDistanceDrivenProjector2D.cpp @@ -32,8 +32,7 @@ along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. #include "astra/DataProjectorPolicies.h" -using namespace std; -using namespace astra; +namespace astra { #include "astra/ParallelBeamDistanceDrivenProjector2D.inl" @@ -140,8 +139,8 @@ bool CParallelBeamDistanceDrivenProjector2D::initialize(CParallelProjectionGeome // Get maximum amount of weights on a single ray int CParallelBeamDistanceDrivenProjector2D::getProjectionWeightsCount(int _iProjectionIndex) { - int maxDim = max(m_pVolumeGeometry->getGridRowCount(), m_pVolumeGeometry->getGridColCount()); - int scale = m_pProjectionGeometry->getDetectorWidth() / min(m_pVolumeGeometry->getPixelLengthX(), m_pVolumeGeometry->getPixelLengthY()); + int maxDim = std::max(m_pVolumeGeometry->getGridRowCount(), m_pVolumeGeometry->getGridColCount()); + int scale = m_pProjectionGeometry->getDetectorWidth() / std::min(m_pVolumeGeometry->getPixelLengthX(), m_pVolumeGeometry->getPixelLengthY()); return maxDim * scale * 10 + 1; } @@ -159,16 +158,4 @@ void CParallelBeamDistanceDrivenProjector2D::computeSingleRayWeights(int _iProje _iStoredPixelCount = p.getStoredPixelCount(); } -//---------------------------------------------------------------------------------------- -// Splat a single point -std::vector<SDetector2D> CParallelBeamDistanceDrivenProjector2D::projectPoint(int _iRow, int _iCol) -{ - // TODO - assert(false); - - std::vector<SDetector2D> res; - - // return result vector - return res; - } diff --git a/src/ParallelBeamLineKernelProjector2D.cpp b/src/ParallelBeamLineKernelProjector2D.cpp index 3654fb0..1765df3 100644 --- a/src/ParallelBeamLineKernelProjector2D.cpp +++ b/src/ParallelBeamLineKernelProjector2D.cpp @@ -157,67 +157,3 @@ void CParallelBeamLineKernelProjector2D::computeSingleRayWeights(int _iProjectio _iStoredPixelCount = p.getStoredPixelCount(); } -//---------------------------------------------------------------------------------------- -// Project Point -std::vector<SDetector2D> CParallelBeamLineKernelProjector2D::projectPoint(int _iRow, int _iCol) -{ - std::vector<SDetector2D> res; - return res; - - // float32 xUL = m_pVolumeGeometry->pixelColToCenterX(_iCol) - m_pVolumeGeometry->getPixelLengthX() * 0.5f; - // float32 yUL = m_pVolumeGeometry->pixelRowToCenterY(_iRow) - m_pVolumeGeometry->getPixelLengthY() * 0.5f; - // float32 xUR = m_pVolumeGeometry->pixelColToCenterX(_iCol) + m_pVolumeGeometry->getPixelLengthX() * 0.5f; - // float32 yUR = m_pVolumeGeometry->pixelRowToCenterY(_iRow) - m_pVolumeGeometry->getPixelLengthY() * 0.5f; - // float32 xLL = m_pVolumeGeometry->pixelColToCenterX(_iCol) - m_pVolumeGeometry->getPixelLengthX() * 0.5f; - // float32 yLL = m_pVolumeGeometry->pixelRowToCenterY(_iRow) + m_pVolumeGeometry->getPixelLengthY() * 0.5f; - // float32 xLR = m_pVolumeGeometry->pixelColToCenterX(_iCol) + m_pVolumeGeometry->getPixelLengthX() * 0.5f; - // float32 yLR = m_pVolumeGeometry->pixelRowToCenterY(_iRow) + m_pVolumeGeometry->getPixelLengthY() * 0.5f; - - // std::vector<SDetector2D> res; - // // loop projectors and detectors - // for (int iProjection = 0; iProjection < m_pProjectionGeometry->getProjectionAngleCount(); ++iProjection) { - - // // get projection angle - // float32 theta = m_pProjectionGeometry->getProjectionAngle(iProjection); - // if (theta >= 7*PIdiv4) theta -= 2*PI; - // bool inverse = false; - // if (theta >= 3*PIdiv4) { - // theta -= PI; - // inverse = true; - // } - - // // calculate distance from the center of the voxel to the ray though the origin - // float32 tUL = xUL * cos(theta) + yUL * sin(theta); - // float32 tUR = xUR * cos(theta) + yUR * sin(theta); - // float32 tLL = xLL * cos(theta) + yLL * sin(theta); - // float32 tLR = xLR * cos(theta) + yLR * sin(theta); - // if (inverse) { - // tUL *= -1.0f; - // tUR *= -1.0f; - // tLL *= -1.0f; - // tLR *= -1.0f; - // } - // float32 tMin = min(tUL, min(tUR, min(tLL,tLR))); - // float32 tMax = max(tUL, max(tUR, max(tLL,tLR))); - - // // calculate the offset on the detectorarray (in indices) - // int dmin = (int)floor(m_pProjectionGeometry->detectorOffsetToIndexFloat(tMin)); - // int dmax = (int)ceil(m_pProjectionGeometry->detectorOffsetToIndexFloat(tMax)); - - // // add affected detectors to the list - // for (int i = dmin; i <= dmax; ++i) { - // if (i >= 0 && i < m_pProjectionGeometry->getDetectorCount()) { - // SDetector2D det; - // det.m_iAngleIndex = iProjection; - // det.m_iDetectorIndex = i; - // det.m_iIndex = iProjection * getProjectionGeometry()->getDetectorCount() + i; - // res.push_back(det); - // } - // } - // } - - // // return result vector - // return res; -} - -//---------------------------------------------------------------------------------------- diff --git a/src/ParallelBeamLinearKernelProjector2D.cpp b/src/ParallelBeamLinearKernelProjector2D.cpp index 5ca1082..120b1a2 100644 --- a/src/ParallelBeamLinearKernelProjector2D.cpp +++ b/src/ParallelBeamLinearKernelProjector2D.cpp @@ -158,64 +158,3 @@ void CParallelBeamLinearKernelProjector2D::computeSingleRayWeights(int _iProject projectSingleRay(_iProjectionIndex, _iDetectorIndex, p); _iStoredPixelCount = p.getStoredPixelCount(); } - -//---------------------------------------------------------------------------------------- -// Splat a single point -std::vector<SDetector2D> CParallelBeamLinearKernelProjector2D::projectPoint(int _iRow, int _iCol) -{ - float32 xUL = m_pVolumeGeometry->pixelColToCenterX(_iCol) - m_pVolumeGeometry->getPixelLengthX() * 1.5f; - float32 yUL = m_pVolumeGeometry->pixelRowToCenterY(_iRow) - m_pVolumeGeometry->getPixelLengthY() * 1.5f; - float32 xUR = m_pVolumeGeometry->pixelColToCenterX(_iCol) + m_pVolumeGeometry->getPixelLengthX() * 1.5f; - float32 yUR = m_pVolumeGeometry->pixelRowToCenterY(_iRow) - m_pVolumeGeometry->getPixelLengthY() * 1.5f; - float32 xLL = m_pVolumeGeometry->pixelColToCenterX(_iCol) - m_pVolumeGeometry->getPixelLengthX() * 1.5f; - float32 yLL = m_pVolumeGeometry->pixelRowToCenterY(_iRow) + m_pVolumeGeometry->getPixelLengthY() * 1.5f; - float32 xLR = m_pVolumeGeometry->pixelColToCenterX(_iCol) + m_pVolumeGeometry->getPixelLengthX() * 1.5f; - float32 yLR = m_pVolumeGeometry->pixelRowToCenterY(_iRow) + m_pVolumeGeometry->getPixelLengthY() * 1.5f; - - std::vector<SDetector2D> res; - // loop projectors and detectors - for (int iProjection = 0; iProjection < m_pProjectionGeometry->getProjectionAngleCount(); ++iProjection) { - - // get projection angle - float32 theta = m_pProjectionGeometry->getProjectionAngle(iProjection); - if (theta >= 7*PIdiv4) theta -= 2*PI; - bool inverse = false; - if (theta >= 3*PIdiv4) { - theta -= PI; - inverse = true; - } - - // calculate distance from the center of the voxel to the ray though the origin - float32 tUL = xUL * cos(theta) + yUL * sin(theta); - float32 tUR = xUR * cos(theta) + yUR * sin(theta); - float32 tLL = xLL * cos(theta) + yLL * sin(theta); - float32 tLR = xLR * cos(theta) + yLR * sin(theta); - if (inverse) { - tUL *= -1.0f; - tUR *= -1.0f; - tLL *= -1.0f; - tLR *= -1.0f; - } - float32 tMin = min(tUL, min(tUR, min(tLL,tLR))); - float32 tMax = max(tUL, max(tUR, max(tLL,tLR))); - - // calculate the offset on the detectorarray (in indices) - int dmin = (int)floor(m_pProjectionGeometry->detectorOffsetToIndexFloat(tMin)); - int dmax = (int)ceil(m_pProjectionGeometry->detectorOffsetToIndexFloat(tMax)); - - // add affected detectors to the list - for (int i = dmin; i <= dmax; ++i) { - if (i >= 0 && i < m_pProjectionGeometry->getDetectorCount()) { - SDetector2D det; - det.m_iAngleIndex = iProjection; - det.m_iDetectorIndex = i; - det.m_iIndex = iProjection * getProjectionGeometry()->getDetectorCount() + i; - res.push_back(det); - } - } - } - - // return result vector - return res; - -} diff --git a/src/ParallelBeamStripKernelProjector2D.cpp b/src/ParallelBeamStripKernelProjector2D.cpp index 4b10b68..849168d 100644 --- a/src/ParallelBeamStripKernelProjector2D.cpp +++ b/src/ParallelBeamStripKernelProjector2D.cpp @@ -160,64 +160,3 @@ void CParallelBeamStripKernelProjector2D::computeSingleRayWeights(int _iProjecti } //---------------------------------------------------------------------------------------- -// Splat a single point -std::vector<SDetector2D> CParallelBeamStripKernelProjector2D::projectPoint(int _iRow, int _iCol) -{ - // float32 xUL = m_pVolumeGeometry->pixelColToCenterX(_iCol) - m_pVolumeGeometry->getPixelLengthX() * 0.5f; - // float32 yUL = m_pVolumeGeometry->pixelRowToCenterY(_iRow) - m_pVolumeGeometry->getPixelLengthY() * 0.5f; - // float32 xUR = m_pVolumeGeometry->pixelColToCenterX(_iCol) + m_pVolumeGeometry->getPixelLengthX() * 0.5f; - // float32 yUR = m_pVolumeGeometry->pixelRowToCenterY(_iRow) - m_pVolumeGeometry->getPixelLengthY() * 0.5f; - // float32 xLL = m_pVolumeGeometry->pixelColToCenterX(_iCol) - m_pVolumeGeometry->getPixelLengthX() * 0.5f; - // float32 yLL = m_pVolumeGeometry->pixelRowToCenterY(_iRow) + m_pVolumeGeometry->getPixelLengthY() * 0.5f; - // float32 xLR = m_pVolumeGeometry->pixelColToCenterX(_iCol) + m_pVolumeGeometry->getPixelLengthX() * 0.5f; - // float32 yLR = m_pVolumeGeometry->pixelRowToCenterY(_iRow) + m_pVolumeGeometry->getPixelLengthY() * 0.5f; - - std::vector<SDetector2D> res; - // // loop projectors and detectors - // for (int iProjection = 0; iProjection < m_pProjectionGeometry->getProjectionAngleCount(); ++iProjection) { - - // // get projection angle - // float32 theta = m_pProjectionGeometry->getProjectionAngle(iProjection); - // if (theta >= 7*PIdiv4) theta -= 2*PI; - // bool inverse = false; - // if (theta >= 3*PIdiv4) { - // theta -= PI; - // inverse = true; - // } - - // // calculate distance from the center of the voxel to the ray though the origin - // float32 tUL = xUL * cos(theta) + yUL * sin(theta); - // float32 tUR = xUR * cos(theta) + yUR * sin(theta); - // float32 tLL = xLL * cos(theta) + yLL * sin(theta); - // float32 tLR = xLR * cos(theta) + yLR * sin(theta); - // if (inverse) { - // tUL *= -1.0f; - // tUR *= -1.0f; - // tLL *= -1.0f; - // tLR *= -1.0f; - // } - // float32 tMin = min(tUL, min(tUR, min(tLL,tLR))); - // float32 tMax = max(tUL, max(tUR, max(tLL,tLR))); - - // // calculate the offset on the detectorarray (in indices) - // int dmin = (int)floor(m_pProjectionGeometry->detectorOffsetToIndexFloat(tMin)); - // int dmax = (int)ceil(m_pProjectionGeometry->detectorOffsetToIndexFloat(tMax)); - - // // add affected detectors to the list - // for (int i = dmin; i <= dmax; ++i) { - // if (i >= 0 && i < m_pProjectionGeometry->getDetectorCount()) { - // SDetector2D det; - // det.m_iAngleIndex = iProjection; - // det.m_iDetectorIndex = i; - // det.m_iIndex = iProjection * getProjectionGeometry()->getDetectorCount() + i; - // res.push_back(det); - // } - // } - // } - - // return result vector - return res; - -} - -//---------------------------------------------------------------------------------------- diff --git a/src/SparseMatrixProjector2D.cpp b/src/SparseMatrixProjector2D.cpp index 6fded6a..46302f3 100644 --- a/src/SparseMatrixProjector2D.cpp +++ b/src/SparseMatrixProjector2D.cpp @@ -174,44 +174,3 @@ void CSparseMatrixProjector2D::computeSingleRayWeights(int _iProjectionIndex, _iStoredPixelCount = p.getStoredPixelCount(); } -//---------------------------------------------------------------------------------------- -// Splat a single point -std::vector<SDetector2D> CSparseMatrixProjector2D::projectPoint(int _iRow, int _iCol) -{ - unsigned int iVolumeIndex = _iCol * m_pVolumeGeometry->getGridRowCount() + _iRow; - - // NOTE: This is very slow currently because we don't have the - // sparse matrix stored in an appropriate form for this function. - std::vector<SDetector2D> ret; - - const CSparseMatrix* pMatrix = dynamic_cast<CSparseMatrixProjectionGeometry2D*>(m_pProjectionGeometry)->getMatrix(); - - for (int iAngle = 0; iAngle < m_pProjectionGeometry->getProjectionAngleCount(); ++iAngle) - { - for (int iDetector = 0; iDetector < m_pProjectionGeometry->getDetectorCount(); ++iDetector) - { - int iRayIndex = iAngle * m_pProjectionGeometry->getDetectorCount() + iDetector; - const unsigned int* piColIndices; - const float32* pfValues; - unsigned int iSize; - - pMatrix->getRowData(iRayIndex, iSize, pfValues, piColIndices); - - for (unsigned int i = 0; i < iSize; ++i) { - if (piColIndices[i] == iVolumeIndex) { - SDetector2D s; - s.m_iIndex = iRayIndex; - s.m_iAngleIndex = iAngle; - s.m_iDetectorIndex = iDetector; - ret.push_back(s); - break; - } else if (piColIndices[i] > iVolumeIndex) { - break; - } - } - } - } - return ret; -} - -//---------------------------------------------------------------------------------------- |