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%------------------------------------------------------------------------
% This file is part of the
% All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA-Toolbox")
%
% Copyright: iMinds-Vision Lab, University of Antwerp
% License: Open Source under GPLv3
% Contact: mailto:astra@ua.ac.be
% Website: http://astra.ua.ac.be
%------------------------------------------------------------------------
vol_geom = astra_create_vol_geom(128, 128, 128);
angles = linspace2(0, pi, 180);
proj_geom = astra_create_proj_geom('parallel3d', 1.0, 1.0, 128, 192, angles);
% Create a simple hollow cube phantom
cube = zeros(128,128,128);
cube(17:112,17:112,17:112) = 1;
cube(33:96,33:96,33:96) = 0;
% Create projection data from this
[proj_id, proj_data] = astra_create_sino3d_cuda(cube, proj_geom, vol_geom);
% Display a single projection image
figure, imshow(squeeze(proj_data(:,20,:))',[])
% Create a data object for the reconstruction
rec_id = astra_mex_data3d('create', '-vol', vol_geom);
% Set up the parameters for a reconstruction algorithm using the GPU
cfg = astra_struct('SIRT3D_CUDA');
cfg.ReconstructionDataId = rec_id;
cfg.ProjectionDataId = proj_id;
% Create the algorithm object from the configuration structure
alg_id = astra_mex_algorithm('create', cfg);
% Run 150 iterations of the algorithm
% Note that this requires about 750MB of GPU memory, and has a runtime
% in the order of 10 seconds.
astra_mex_algorithm('iterate', alg_id, 150);
% Get the result
rec = astra_mex_data3d('get', rec_id);
figure, imshow(squeeze(rec(:,:,65)),[]);
% Clean up. Note that GPU memory is tied up in the algorithm object,
% and main RAM in the data objects.
astra_mex_algorithm('delete', alg_id);
astra_mex_data3d('delete', rec_id);
astra_mex_data3d('delete', proj_id);
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