Initial import

1 files changed, 48 insertions, 0 deletions

diff --git a/biomedisa/Makefile b/biomedisa/Makefile
new file mode 100644
index 0000000..c14b89e
--- /dev/null
+++ b/biomedisa/Makefile
@@ -0,0 +1,48 @@
+all: build
+#install: push
+
+.PHONY: rebuild build push start stop restart bash
+
+build: Dockerfile
+	docker build --tag chsa/biomedisa:latest .
+
+rebuild: Dockerfile
+	docker build --no-cache --tag chsa/biomedisa:latest .
+
+#push: build
+#	docker push chsa/biomedisa:latest
+
+start: build
+	@if [ `docker ps | grep adei-mysql | wc -l` -eq 0 ]; then \
+	    if [ `docker ps -a | grep adei-mysql | wc -l` -eq 0 ]; then \
+		docker run --name adei-mysql -p 53306:3306/tcp  -e MYSQL_ROOT_PASSWORD="adei" -e MYSQL_DATABASE="adei" -e MYSQL_USER="adei" -e MYSQL_PASSWORD="adei" -d mysql:5.7 ;\
+	    else \
+		docker start adei-mysql ;\
+	    fi ;\
+	fi ;\
+	if [ `docker ps | grep chsa/adei | wc -l` -eq 0 ]; then \
+	    if [ `docker ps -a | grep adei-full | wc -l` -gt 0 ]; then \
+		echo "Removing the stalled copy..." ;\
+		docker rm adei-full ;\
+	    fi ;\
+	    docker run -p 8000:80 --name adei-full --link adei-mysql:adei-mysql -e ADEI_PORTS=8000 -t -d chsa/adei:latest ;\
+	else \
+	    echo "Already running..." ;\
+	fi
+
+stop:
+	@if [ `docker ps | grep adei-full | wc -l` -gt 0 ]; then \
+	    docker stop adei-full ;\
+	    docker rm adei-full ;\
+	fi
+
+stop_mysql: stop
+	docker stop adei-mysql
+
+restart:
+	make stop
+	make start
+
+bash: build
+	docker run --runtime=nvidia -it chsa/biomedisa /bin/bash
+#	docker exec -it chsa/biomedisa /bin/bash